CDS

Accession Number TCMCG019C15129
gbkey CDS
Protein Id XP_022945802.1
Location join(2389114..2389145,2389268..2389385,2389509..2389630,2389767..2389859,2390152..2390224,2390301..2390391,2390491..2390543,2390890..2390954,2391596..2391704,2391816..2391926,2392943..2393002,2393487..2393525,2394048..2394098,2394190..2394288,2395036..2395095,2395234..2395326,2395643..2395744,2396760..2396870,2397037..2397153,2398224..2398340,2398468..2398548,2399036..2399140,2399244..2399324,2399411..2399542,2399626..2399670,2400178..2400255,2400323..2400462,2400652..2400742,2402083..2402201,2402327..2402462,2402555..2402685,2403320..2403445,2403531..2403586,2404584..2404654,2404794..2404878,2404961..2405064,2405390..2405518,2406129..2406179)
Gene LOC111449942
GeneID 111449942
Organism Cucurbita moschata

Protein

Length 1158aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA418582
db_source XM_023090034.1
Definition DNA-directed RNA polymerase III subunit 2 isoform X1 [Cucurbita moschata]

EGGNOG-MAPPER Annotation

COG_category K
Description DNA-directed RNA polymerase
KEGG_TC -
KEGG_Module M00181        [VIEW IN KEGG]
KEGG_Reaction R00435        [VIEW IN KEGG]
R00441        [VIEW IN KEGG]
R00442        [VIEW IN KEGG]
R00443        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE br01611        [VIEW IN KEGG]
ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K03021        [VIEW IN KEGG]
EC 2.7.7.6        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko03020        [VIEW IN KEGG]
ko04623        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map03020        [VIEW IN KEGG]
map04623        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0001817        [VIEW IN EMBL-EBI]
GO:0001819        [VIEW IN EMBL-EBI]
GO:0002682        [VIEW IN EMBL-EBI]
GO:0002684        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003899        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005666        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006383        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032479        [VIEW IN EMBL-EBI]
GO:0032481        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032648        [VIEW IN EMBL-EBI]
GO:0032728        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034062        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045088        [VIEW IN EMBL-EBI]
GO:0045089        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050776        [VIEW IN EMBL-EBI]
GO:0050778        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0097747        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTCGTGAAGCCGTCGGACGACGATTCAAAGAACGGGAAGCAAGTCGACGATCCTAATGCAATCGGTTCGGACATTGACAAGCAATTCCTTGGCCTTCCTATCAAGTCAGCCGTCGACAAGTTTCAACTTCTTCCTGAATTTTTGAAGGTAAGAGGTCTGGTTCGGCAACATTTGGATTCCTTTAACTACTTCGTGAATACAGAAATTAAAAAGATAGTCAAGGCCAATGATCGAATTGAATCCAGCACCGATCCGAGTATTTATCTTAGGTTTCTAGATGTAAGAGTTGGCGAGCCTTCTGTGACCATGAATGCTGTCAGTGAATCTATTAGTCCTCATATGTGCCGCTTATCTGACCTTACATATGCCGCTCCTATACTAGTTGATATAGAATACATCGAAGAACATCATGCACAAAAAGCCCCAAGGGAGAAGAAAGACGTGGTCATTGGGAGGATGCCTATAATGTTACGAAGCCGTTGCTGTGTTTTATATGGAAAAGACGAGGCTGAACTTGCAAGACTTGGTGAGTGTCCACTTGATCCTGGCGGCTATTTTGTAATCAAGGGCACCGAGAAGGTAGTCTTGATTCAAGAACAACTTTCAAAGAACAGGATTATCATTGATACTGACAAAAAGGGGAATATAAATGCATCTGTTACAAGCAGCACAGAGGCAACAAAAAGTAAAACAGTTATTAAAATGGAAAATGAGAAGATCTATCTCCAGCTCAATATATTTACCACACCAAAGATTCCCATTGTGGTGGTCTTGAAGGCTATGGGAATGGAGAGTATTCAAGAAGTTGTGCAAATGGTTGGAAGAGATCCTCGATACGGGGCCCTACTTCTTCCATCAATTGAGGAATGTGCGAAGGAAAAAATATATACACAAGAACAAGCATTAGAGTATCTTGAGACAAAGGTGAAGAAGTTTCAATTTTTTAGTGCTCCTCCAGAAAAGGAAGGAAGGGCTCTAGGGATACTTCGTGATGTTTTTCTTGCCAATGTCCCAGTCCATAAAAATAACTTTCTTCCAAAATGCATATATGTTGGCGTCATGATGAGACGGATGATGGATGCAATTTTAAATAAGGATGCTATGGATGACAAGGATTATGTGGGCAACAAACGTTTGGAGCTATCTGGTCAGTTGATCTCGTTACTTTTTGAGGATTTATTCAAGACAATGGTTAGTGAAGTGAAGAAGACAGTTGATAAGCTTCTTGGAAAGCACAGTAGGTCAAGTCGGTTTGACTTCTCTCAGCATCTGAATTCGAACATTATTTCTTTTGGGCTAGAAAGGACCCTTTCAACTGGTAATTGGGATGTTAAAAGGTTCAGGATGCACCGGAAGGGGATGAGTCAGGTTCTTGCTAGGTTATCTTTTATTTCTACTATGGGTCATGTGACTAGAGTCTCCCCACAGTTTGAGAAGTCCAGGAAAGTTAGTGGACCAAGAGCACTACAACCTAGTCAGTGGGGTATGCTTTGTCCATGCGATACTCCAGAAGGTGAGGCTTGTGGACTTGTAAAAAACTTGGCTCTGATGACTCATGTAACGACAGATCAGGAAGAAGGCCCATTAATTTCTTTGTGCTACTGTTTGGGTGTCGAAGACTTGGAGCTTCTTTCTGCAGAAGAGCTACATACACCAAATTCATTTCTTGTTATTTTCAATGGGCGTATCCTTGGCAAACATCGGCGGCCTCAGTACTTTGCTACTGGTATGAGAATGCTGAGGAGAGCTGGAAAAATTGGCGAGTTTGTCAGTGTCTTTGTGAATGAGAAGCAGCACTGTGTATACATTGCTTCTGATGGAGGACGAGTTTGTCGTCCGCTTGTCATTGCTGACAAAGGTGTATCGAGGATTAAAGAATACCATATGAAAGAGTTATCGGATGGAGTCCGTACATTTGATGATTTTTTACGGGAAGGTTTAATCGAGTATCTTGATGTGAACGAGGAGAATAATGCTTTGATTGCTTTGTATGAAGGAGAAGCTACACCAGAAACAACTCATATTGAGATTGAGCCCTTCACCATATTAGGCGTTGTAGCTGGGTTAATTCCATATCCTCATCATAACCAATCGCCTAGAAACACATATCAGTGCGCTATGGGAAAGCAAGCCATGGGAAACATCGCATACAATCAGTTAAAACGAATGGACACATTACTGTACTTGCTGGTGTATCCCCAGAGGCCCTTATTAACAACGAGGACTATTGAGCTGGTTGGATATGACAAGCTTGGAGCAGGGCAGAATGCAACTGTTGCTGTCATGAGTTACAGTGGCTATGATATAGAGGATGCAATCGTCATGAATAAATCGTCACTTGATCGTGGTTTTGGTCGTTGTATTGTTTTTAAGAAATATTCTTCTGTCAATCAGAAGTATGAAAACAACACTGCTGACAGGATAGTCAGGCCGAATAGAAACGAAGATTATTCGGGAAATATGCAGATATTAGATGATGATGGACTTGCTGCTCCGGGAGAGATTATTAGACCAAACGACGTTTATGTCAACAAACAAACCCCCATGATAACGAAAGGGACACCCTTACCAGGAATACCAGATAGTGCGTATAGGCCTTGTAAACAAATATTTAAAGGTTCTGAAGGAGAGCCTACCGTGATCGATAGAGTGGCTCTTTCTACAGATAAAAATGACTGTTTATGTATCAAATTCTTGATTCGCCAGACCCGTAGACCAGAGCTTGGTGATAAGTTCAGTAGCAGACATGGACAAAAAGGTGTATGTGGCACAATTGTTCAACAAGAGGATTTCCCATTTTCTGAACGTGGAATTTGTCCAGATCTAATTATGAATCCTCATGGATTCCCAAGTCGAATGACAGTGGGGAAGATGATTGAACTCCTAGGAGGAAAAGCAGGGGTTTCATGTGGTAGGTTTCACTATGGTAGTGCATTTGGAGAGCCAAGTGGTCATGCAGACAAAGTTGATGCTATAAGCGAGACTCTTATCAAGAGAGGCTTCAGTTACAATGGGAAAGACATTCTTTACTCAGGAATCACAGGTTGCCCATTACAAGCATATATATTTATGGGACCAATTTACTACCAGAAGTTAAAGCACATGGTCTTGGACAAAATGCATGCTCGAGGTAGTGGTCCACGTGTCATGTTAACTAGACAACCAACAGAAGGGAGAGCCAGGAATGGAGGACTTCGAGTTGGAGAAATGGAACGCGATTGTTTGATTGCGTATGGTGCTAGTATGCTGATTTTTGAACGTTTAATGGTCTCAAGTGATCCTTTCGAAGTTCAGGTCTGCAGAGTTTGTGGTTTGTTGGGATATTACAACCACAAGCTAAAAGCGGGAATCTGTTCTTCATGTAAAAATGGAGATAACATATCCACCATGAAACTTCCATATGCGTGCAAGCTCCTAATCCAGGAACTTCAATCTATGAATATTGTTCCTCGCCTAAAACTAGCCGAAGCCTGA
Protein:  
MVVKPSDDDSKNGKQVDDPNAIGSDIDKQFLGLPIKSAVDKFQLLPEFLKVRGLVRQHLDSFNYFVNTEIKKIVKANDRIESSTDPSIYLRFLDVRVGEPSVTMNAVSESISPHMCRLSDLTYAAPILVDIEYIEEHHAQKAPREKKDVVIGRMPIMLRSRCCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVVLIQEQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIVVVLKAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFFSAPPEKEGRALGILRDVFLANVPVHKNNFLPKCIYVGVMMRRMMDAILNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMVSEVKKTVDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLSTGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVIFNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIADKGVSRIKEYHMKELSDGVRTFDDFLREGLIEYLDVNEENNALIALYEGEATPETTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLKRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVNQKYENNTADRIVRPNRNEDYSGNMQILDDDGLAAPGEIIRPNDVYVNKQTPMITKGTPLPGIPDSAYRPCKQIFKGSEGEPTVIDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDILYSGITGCPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSDPFEVQVCRVCGLLGYYNHKLKAGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAEA